A to G, H to R, S to Z, or by topic.

• save_pdb_ss – see obsolete
• scene_animation – see scenes
• scene_animation_duration – see scenes
• scene_buttons – see scenes
• scene_current_name – see scenes
• scene_loop – see scenes
• scene_restart_movie_delay – see obsolete
• scenes_changed – see scenes
• sculpt_angl_weight – see sculpting
• sculpt_auto_center – see sculpting
• sculpt_avd_excl – see sculpting
• sculpt_avd_gap – see sculpting
• sculpt_avd_range – see sculpting
• sculpt_avd_weight – see sculpting
• sculpt_bond_weight – see sculpting
• sculpt_field_mask – see sculpting
• sculpt_hb_overlap – see sculpting
• sculpt_hb_overlap_base – see sculpting
• sculpting – see sculpting
• sculpting_cycles – see sculpting
• sculpt_line_weight – see sculpting
• sculpt_max_max – see sculpting
• sculpt_max_min – see sculpting
• sculpt_max_scale – see sculpting
• sculpt_max_weight – see sculpting
• sculpt_memory – see sculpting
• sculpt_min_max – see sculpting
• sculpt_min_min – see sculpting
• sculpt_min_scale – see sculpting
• sculpt_min_weight – see sculpting
• sculpt_nb_interval – see sculpting
• sculpt_plan_weight – see sculpting
• sculpt_pyra_weight – see sculpting
• sculpt_tors_tolerance – see sculpting
• sculpt_tors_weight – see sculpting
• sculpt_tri_max – see sculpting
• sculpt_tri_min – see sculpting
• sculpt_tri_mode – see sculpting
• sculpt_tri_scale – see sculpting
• sculpt_tri_weight – see sculpting
• sculpt_vdw_scale14 – see sculpting
• sculpt_vdw_scale – see sculpting
• sculpt_vdw_vis_max – see sculpting
• sculpt_vdw_vis_mid – see sculpting
• sculpt_vdw_vis_min – see sculpting
• sculpt_vdw_vis_mode – see sculpting
• sculpt_vdw_weight14 – see sculpting
• sculpt_vdw_weight – see sculpting
• secondary_structure – see editing
• security – see automatic tasks
• sel_counter – see selections
• selection_overlay – see selections
• selection_round_points – see selections
• selection_visible_only – see selections
• selection_width – see selections
• selection_width_max – see selections
• selection_width_scale – see selections
• seq_view – see sequences
• seq_view_alignment – see sequences
• seq_view_color – see sequences
• seq_view_discrete_by_state – see sequences
• seq_view_fill_char – see sequences
• seq_view_fill_color – see sequences
• seq_view_format – see sequences
• seq_view_label_color – see sequences
• seq_view_label_mode – see sequences
• seq_view_label_spacing – see sequences
• seq_view_label_start – see sequences
• seq_view_location – see sequences
• seq_view_overlay – see sequences
• seq_view_unaligned_color – see sequences
• seq_view_unaligned_mode – see sequences
• session_changed – see session files
• session_file – see session files
• session_migration – see session files
• session_version_check – see session files
• shininess – see lighting
• shader_path – see glsl
• show_alpha_checker – see background
• show_progress – see internal gui
• simplify_display_lists – see memory & performance
• single_image – see states & movies
• slice_dynamic_grid – see slices
• slice_dynamic_grid_resolution – see slices
• slice_grid – see slices
• slice_height_map – see slices
• slice_height_scale – see slices
• slice_track_camera – see slices
• slow_idle – see memory & performance
• smooth_color_triangle – see obsolete
• solvent_radius – see surfaces
• spec_count – see lighting
• spec_direct – see lighting
• spec_direct_power – see lighting
• spec_power – see ray
• spec_reflect – see ray
• specular – see lighting
• specular_intensity – see lighting
• sphere_color – see spheres
• sphere_mode – see spheres
• sphere_point_max_size – see spheres
• sphere_point_size – see spheres
• sphere_quality – see spheres
• sphere_scale – see spheres
• sphere_solvent – see spheres
• sphere_transparency – see spheres
• sphere_use_shader – see glsl
• spheroid_fill – see obsolete
• spheroid_scale – see obsolete
• spheroid_smooth – see obsolete
• ss_helix_phi_exclude – see secondary structure
• ss_helix_phi_include – see secondary structure
• ss_helix_phi_target – see secondary structure
• ss_helix_psi_exclude – see secondary structure
• ss_helix_psi_include – see secondary structure
• ss_helix_psi_target – see secondary structure
• ss_strand_phi_exclude – see secondary structure
• ss_strand_phi_include – see secondary structure
• ss_strand_phi_target – see secondary structure
• ss_strand_psi_exclude – see secondary structure
• ss_strand_psi_include – see secondary structure
• ss_strand_psi_target – see secondary structure
• state – see states & movies
• static_singletons – see states & movies
• stereo – see stereo
• stereo_angle – see stereo
• stereo_double_pump_mono – see stereo
• stereo_mode – see stereo
• stereo_shift – see stereo
• stick_ball – see sticks
• stick_ball_ratio – see sticks
• stick_color – see sticks
• stick_fixed_radius – see sticks
• stick_nub – see sticks
• stick_overlap – see sticks
• stick_quality – see sticks
• stick_radius – see sticks
• stick_transparency – see sticks
• stick_use_shader – see glsl
• stick_valence_scale – see sticks
• stop_on_exceptions – see troubleshooting & debugging
• surface_best – see surfaces
• surface_carve_cutoff – see surfaces
• surface_carve_normal_cutoff – see surfaces
• surface_carve_selection – see surfaces
• surface_carve_state – see surfaces
• surface_circumscribe – see surfaces
• surface_clear_cutoff – see surfaces
• surface_clear_selection – see surfaces
• surface_clear_state – see surfaces
• surface_color – see surfaces
• surface_debug – see surfaces
• surface_miserable – see surfaces
• surface_mode – see surfaces
• surface_negative_color – see surfaces
• surface_negative_visible – see surfaces
• surface_normal – see surfaces
• surface_optimize_subsets – see surfaces
• surface_poor – see surfaces
• surface_proximity – see surfaces
• surface_quality – see surfaces
• surface_ramp_above_mode – see surfaces
• surface_solvent – see surfaces
• surface_trim_cutoff – see surfaces
• surface_trim_factor – see surfaces
• surface_type – see surfaces
• suspend_undo – see undo
• suspend_undo_atom_count – see undo
• suspend_updates – see synchronization
• surface_use_shader – see glsl
• swap_dsn6_bytes – see maps
• sweep_angle – see rocking
• sweep_mode – see rocking
• sweep_phase – see rocking
• sweep_speed – see rocking
• test1 – see troubleshooting & debugging
• test2 – see troubleshooting & debugging
• text – see internal gui
• texture_fonts – see memory & performance
• trace_atoms_mode – see bonds
• transparency – see transparency
• transparency_mode – see transparency
• transparency_picking_mode – see transparency
• triangle_max_passes – see obsolete
• trim_dots – see dots
• two_sided_lighting – see lighting
• use_display_lists – see memory & performance
• use_shaders – see glsl
• valence – see bonds
• valence_default – see bonds
• valence_size – see bonds
• validate_object_names – see troubleshooting & debugging
• virtual_trackball – see mouse & buttons
• wildcard – see selections
• wizard_prompt_mode – see internal gui
• wrap_output – see internal gui